vesicle_triangulator — Example output

This folder is the full output bundle produced by running vesicle_triangulator on the two-channel inputs in ../example_input/. The tool organizes its outputs into three subfolders plus a top-level parameter log:

1. ch1/ — per-channel-01 artifacts: the thresholded mask, the labeled connected-component image, the point centroids (as CSV), and the centroid overlay.
2. ch2/ — identical set of artifacts for channel-02.
3. mixed/ — the joint outputs that use points from both channels: the full Delaunay triangulation, a trimmed version, edge-colored variants that highlight “mixed” (cross-channel) vs “same” (within-channel) edges, per-vertex mixing histograms, and an Excel summary of the mixing statistics.
4. parameter_log.xlsx — a single workbook capturing every parameter used for this run (thresholds, colors, trim settings, output paths) so the run is fully reproducible.

• 📁 ch1/
• 📁 ch2/
• 📁 mixed/
• 📄 parameter_log.xlsx – Download

📜 Files in this folder

• ch1/ — Channel-01 intermediates: thresholded mask, connected-component labeling, point centroids (CSV), and the centroid overlay. See ch1/.
• ch2/ — Channel-02 intermediates: same set of artifacts as ch1/ but for the second fluorophore. See ch2/.
• mixed/ — Joint outputs combining both channels: the full and trimmed Delaunay triangulations, edge-classified overlays (“mixed” cross-channel edges vs “same” within-channel edges), per-vertex mixing histograms, and a mixing-summary workbook. See mixed/.
• parameter_log.xlsx — Per-run parameter log: channel thresholds, colors used to render each channel, triangulation trim settings, and output paths. One workbook per run, used as the audit trail that makes every example reproducible.